Pyridine bioisosteres of potent GluN2B subunit containing NMDA receptor antagonists with benzo[7]annulene scaffold

Eur J Med Chem. 2018 Sep 5:157:397-404. doi: 10.1016/j.ejmech.2018.08.003. Epub 2018 Aug 4.

Abstract

It has been reported that benzo [7]annulen-7-amines bearing electron withdrawing substituents such as 3d with a 2-Cl or 3e with a 2-NO2 moiety show very high affinity towards the ifenprodil binding site of GluN2B subunit containing NMDA receptors. Therefore, bioisosteres of 3 with an electron deficient pyridine ring instead of the chloro- or nitrobenzene ring were envisaged. Starting from pyridine-2,3-dicarboxylic acid (5) a five-step synthesis of the key intermediate, the ketone 10, was developed. Reductive amination with various primary amines and NaBH(OAc)3 led to the homologous secondary amines 11a-c. Subsequent methylation yielded the tertiary amines 12b and 12c. Receptor binding studies with [3H]ifenprodil revealed Ki-values above 100 nM for the most active phenylpropyl- and phenylbutylamines 11b and 11c. The >100-fold reduced GluN2B affinity of pyridines 11b and 11c compared to the GluN2B affinity of the corresponding chloro- and nitrobenzene derivatives 3d and 3e indicates that the pyridine ring is not tolerated as bioisosteric replacement of the chloro- or nitrobenzene ring in this type of compounds.

Keywords: Affinity; GluN2B antagonists; Ifenprodil binding site; NMDA receptor; Pyridine-benzene bioisosteres; Selectivity; Structure-affinity relationships; [7]annuleno[b]pyridin-7-amines.

MeSH terms

  • Amines / chemical synthesis
  • Amines / chemistry
  • Amines / pharmacology*
  • Animals
  • Cells, Cultured
  • Dose-Response Relationship, Drug
  • Guinea Pigs
  • Mice
  • Molecular Structure
  • Polycyclic Compounds / chemical synthesis
  • Polycyclic Compounds / chemistry
  • Polycyclic Compounds / pharmacology*
  • Pyridines / chemistry*
  • Pyridines / pharmacology*
  • Rats
  • Receptors, N-Methyl-D-Aspartate / antagonists & inhibitors*
  • Structure-Activity Relationship

Substances

  • Amines
  • NR2B NMDA receptor
  • Polycyclic Compounds
  • Pyridines
  • Receptors, N-Methyl-D-Aspartate
  • benzo (7)annulen-7-amine
  • pyridine